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1

Generation of Induced Pluripotent Stem Cells Using Recombinant Proteins

Hongyan Zhou, Shili Wu, Jin Young Joo, Saiyong Zhu, Dong Wook Han, Tongxiang Lin, Sunia Trauger, Geoffery Bien, Susan Yao, Yong Zhu, Gary Siuzdak, Hans R. Schöler, Lingxun Duan, Sheng Ding

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 599 KB

english, 2009

2

Maintaining retinal astrocytes normalizes revascularization and prevents vascular pathology associated with oxygen-induced retinopathy

Michael I. Dorrell, Edith Aguilar, Ruth Jacobson, Sunia A. Trauger, Jeffrey Friedlander, Gary Siuzdak, Martin Friedlander

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 1.32 MB

english, 2010

3

Metabolic oxidation regulates embryonic stem cell differentiation

Yanes, Oscar, Clark, Julie, Wong, Diana M, Patti, Gary J, Sánchez-Ruiz, Antonio, Benton, H Paul, Trauger, Sunia A, Desponts, Caroline, Ding, Sheng, Siuzdak, Gary

Journal:

Nature Chemical Biology

Année:

2010

Langue:

english

Fichier:

PDF, 546 KB

english, 2010

4

Solvent-Dependent Metabolite Distribution, Clustering, and Protein Extraction for Serum Profiling with Mass Spectrometry

Want, Elizabeth J., O'Maille, Grace, Smith, Colin A., Brandon, Theodore R., Uritboonthai, Wilasinee, Qin, Chuan, Trauger, Sunia A., Siuzdak, Gary

Journal:

Analytical Chemistry

Année:

2006

Langue:

english

Fichier:

PDF, 714 KB

english, 2006

5

Regulation of astrocyte activation by glycolipids drives chronic CNS inflammation

Mayo, Lior, Trauger, Sunia A, Blain, Manon, Nadeau, Meghan, Patel, Bonny, Alvarez, Jorge I, Mascanfroni, Ivan D, Yeste, Ada, Kivisäkk, Pia, Kallas, Keith, Ellezam, Benjamin, Bakshi, Rohit, Prat, Alexa

Journal:

Nature Medicine

Année:

2014

Langue:

english

Fichier:

PDF, 1.81 MB

english, 2014

6

The Identification of an Adenovirus Receptor by Using Affinity Capture and Mass Spectrometry

Sunia A. Trauger, Eugene Wu, Steve J. Bark, Glen R. Nemerow, Gary Siuzdak

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 199 KB

english, 2004

7

Metabonomic assessment of toxicity of 4-fluoroaniline, 3,5-difluoroaniline and 2-fluoro-4-methylaniline to the earthworm Eisenia veneta (rosa): Identification of new endogenous biomarkers

Jacob G. Bundy, Eva M. Lenz, Nigel J. Bailey, Claire L. Gavaghan, Claus Svendsen, David Spurgeon, Peter K. Hankard, Daniel Osborn, Jason M. Weeks, Sunia A. Trauger, Paul Speir, Ian Sanders, John C Lin

Journal:

Environmental Toxicology and Chemistry

Année:

2002

Langue:

english

Fichier:

PDF, 108 KB

english, 2002

8

The Glycerophospho Metabolome and Its Influence on Amino Acid Homeostasis Revealed by Brain Metabolomics of GDE1(−/−) Mice

Florian Kopp, Toru Komatsu, Daniel K. Nomura, Sunia A. Trauger, Jason R. Thomas, Gary Siuzdak, Gabriel M. Simon, Benjamin F. Cravatt

Journal:

Chemistry & Biology

Année:

2010

Langue:

english

Fichier:

PDF, 758 KB

english, 2010

9

Phosphonium labeling for increasing metabolomic coverage of neutral lipids using electrospray ionization mass spectrometry

Hin-Koon Woo, Eden P. Go, Linh Hoang, Sunia A. Trauger, Benjamin Bowen, Gary Siuzdak, Trent R. Northen

Journal:

Rapid Communications in Mass Spectrometry

Année:

2009

Langue:

english

Fichier:

PDF, 298 KB

english, 2009

10

Mass Spectrometry Reveals Specific and Global Molecular Transformations during Viral Infection

Go, Eden P., Wikoff, William R., Shen, Zhouxin, O'Maille, Grace, Morita, Hirotoshi, Conrads, Thomas P., Nordstrom, Anders, Trauger, Sunia A., Uritboonthai, Wilasinee, Lucas, David A.

Journal:

Journal of Proteome Research

Année:

2006

Langue:

english

Fichier:

PDF, 388 KB

english, 2006

11

A Computational Framework for Proteome-Wide Pursuit and Prediction of Metalloproteins using ICP-MS and MS/MS Data

W Andrew Lancaster, Jeremy L Praissman, Farris L Poole, Aleksandar Cvetkovic, Angeli Lal Menon, Joseph W Scott, Francis E Jenney, Michael P Thorgersen, Ewa Kalisiak, Junefredo V Apon, Sunia A Trauger,

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 877 KB

english, 2011

12

Generation of Induced Pluripotent Stem Cells Using Recombinant Proteins

Hongyan Zhou, Shili Wu, Jin Young Joo, Saiyong Zhu, Dong Wook Han, Tongxiang Lin, Sunia Trauger, Geoffery Bien, Susan Yao, Yong Zhu, Gary Siuzdak, Hans R. Schöler, Lingxun Duan, Sheng Ding

Journal:

Année:

2009

Fichier:

PDF, 34 KB

2009

13

Identification of a New Endogenous Metabolite and the Characterization of Its Protein Interactions through an Immobilization Approach

Kalisiak, Jarosław, Trauger, Sunia A., Kalisiak, Ewa, Morita, Hirotoshi, Fokin, Valery V., Adams, Mike W. W., Sharpless, K. Barry, Siuzdak, Gary

Journal:

Journal of the American Chemical Society

Année:

2009

Langue:

english

Fichier:

PDF, 264 KB

english, 2009

14

High Sensitivity and Analyte Capture with Desorption/Ionization Mass Spectrometry on Silylated Porous Silicon

Trauger, Sunia A., Go, Eden P., Shen, Zhouxin, Apon, Junefredo V., Compton, Bruce J., Bouvier, Edouard S. P., Finn, M. G., Siuzdak, Gary

Journal:

Analytical Chemistry

Année:

2004

Langue:

english

Fichier:

PDF, 173 KB

english, 2004

15

Correlating the Transcriptome, Proteome, and Metabolome in the Environmental Adaptation of a Hyperthermophile

Trauger, Sunia A., Kalisak, Ewa, Kalisiak, Jaroslaw, Morita, Hirotoshi, Weinberg, Michael V., Menon, Angeli Lal, Poole II, Farris L., Adams, Michael W. W., Siuzdak, Gary

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2008

16

Cerebrospinal Fluid Proteomics Reveals Potential Pathogenic Changes in the Brains of SIV-Infected Monkeys

Pendyala, Gurudutt, Trauger, Sunia A., Kalisiak, Ewa, Ellis, Ronald J., Siuzdak, Gary, Fox, Howard S.

Journal:

Journal of Proteome Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2009

17

Identification of collagen-based materials in cultural heritage

Kirby, Daniel P., Buckley, Michael, Promise, Ellen, Trauger, Sunia A., Holdcraft, T. Rose

Journal:

The Analyst (Royal Society of Chemistry)

Année:

2013

Langue:

english

Fichier:

PDF, 628 KB

english, 2013

18

Assignment of Endogenous Substrates to Enzymes by Global Metabolite Profiling †

Saghatelian, Alan, Trauger, Sunia A., Want, Elizabeth J., Hawkins, Edward G., Siuzdak, Gary, Cravatt, Benjamin F.

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 221 KB

english, 2004

19

Quantitative ESI-TOF Analysis of Macromolecular Assembly Kinetics

Bunner, Anne E., Trauger, Sunia A., Siuzdak, Gary, Williamson, James R.

Journal:

Analytical Chemistry

Année:

2008

Langue:

english

Fichier:

PDF, 1.81 MB

english, 2008

20

Quantitative Plasma Proteomic Profiling Identifies the Vitamin E Binding Protein Afamin as a Potential Pathogenic Factor in SIV Induced CNS Disease

Pendyala, Gurudutt, Trauger, Sunia A., Siuzdak, Gary, Fox, Howard S.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 407 KB

english, 2010

21

Response and Recovery in the Plasma Metabolome Tracks the Acute LCMV-Induced Immune Response

Wikoff, William R., Kalisak, Ewa, Trauger, Sunia, Manchester, Marianne, Siuzdak, Gary

Journal:

Journal of Proteome Research

Année:

2009

Langue:

english

Fichier:

PDF, 3.34 MB

english, 2009

22

Selective Metabolite and Peptide Capture/Mass Detection Using Fluorous Affinity Tags

Go, Eden P., Uritboonthai, Wilasinee, Apon, Junefredo V., Trauger, Sunia A., Nordstrom, Anders, O'Maille, Grace, Brittain, Scott M., Peters, Eric C., Siuzdak, Gary

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 290 KB

english, 2007

23

Lysine Addressability and Mammalian Cell Interactions of Bacteriophage λ Procapsids

Koudelka, Kristopher J., Ippoliti, Shannon, Medina, Elizabeth, Shriver, Leah P., Trauger, Sunia A., Catalano, Carlos E., Manchester, Marianne

Journal:

Biomacromolecules

Année:

2013

Langue:

english

Fichier:

PDF, 3.38 MB

english, 2013

24

Metabolomics annotates ABHD3 as a physiologic regulator of medium-chain phospholipids

Long, Jonathan Z, Cisar, Justin S, Milliken, David, Niessen, Sherry, Wang, Chu, Trauger, Sunia A, Siuzdak, Gary, Cravatt, Benjamin F

Journal:

Nature Chemical Biology

Année:

2011

Langue:

english

Fichier:

PDF, 341 KB

english, 2011

25

Warfarin untargeted metabolomics study identifies novel procoagulant ethanolamide plasma lipids

Deguchi, Hiroshi, Elias, Darlene J., Trauger, Sunia, Zhang, Hui-Min, Kalisiak, Ewa, Siuzdak, Gary, Griffin, John H.

Journal:

British Journal of Haematology

Année:

2014

Langue:

english

Fichier:

PDF, 243 KB

english, 2014

26

Data-Driven Synthesis of Proteolysis-Resistant Peptide Hormones

Prothiwa, Michaela, Syed, Ismail, Huising, Mark O., van der Meulen, Talitha, Donaldson, Cynthia J., Trauger, Sunia A., Kahn, Barbara B., Saghatelian, Alan

Journal:

Journal of the American Chemical Society

Année:

2014

Langue:

english

Fichier:

PDF, 386 KB

english, 2014

27

Short Communication: Quantitative Proteomic Plasma Profiling Reveals Activation of Host Defense to Oxidative Stress in Chronic SIV and Methamphetamine Comorbidity

Pendyala, Gurudutt, Trauger, Sunia A., Siuzdak, Gary, Fox, Howard S.

Journal:

AIDS Research and Human Retroviruses

Année:

2011

Langue:

english

Fichier:

PDF, 117 KB

english, 2011

28

Activation of Human Brown Adipose Tissue by a β3-Adrenergic Receptor Agonist

Cypess, Aaron M., Weiner, Lauren S., Roberts-Toler, Carla, Elía, Elisa Franquet, Kessler, Skyler H., Kahn, Peter A., English, Jeffrey, Chatman, Kelly, Trauger, Sunia A., Doria, Alessandro, Kolodny, Ge

Journal:

Cell Metabolism

Année:

2015

Langue:

english

Fichier:

PDF, 978 KB

english, 2015

29

Endothelial Targeting of Cowpea Mosaic Virus (CPMV) via Surface Vimentin

Koudelka, Kristopher J., Destito, Giuseppe, Plummer, Emily M., Trauger, Sunia A., Siuzdak, Gary, Manchester, Marianne, Andino, Raul

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 382 KB

english, 2009

30

Ant and Mite Diversity Drives Toxin Variation in the Little Devil Poison Frog

McGugan, Jenna R., Byrd, Gary D., Roland, Alexandre B., Caty, Stephanie N., Kabir, Nisha, Tapia, Elicio E., Trauger, Sunia A., Coloma, Luis A., O’Connell, Lauren A.

Journal:

Journal of Chemical Ecology

Année:

2016

Langue:

english

Fichier:

PDF, 3.94 MB

english, 2016

31

METLIN

Smith, Colin A, Maille, Grace O??, Want, Elizabeth J, Qin, Chuan, Trauger, Sunia A, Brandon, Theodore R, Custodio, Darlene E, Abagyan, Ruben, Siuzdak, Gary

Journal:

Therapeutic Drug Monitoring

Année:

2005

Langue:

english

Fichier:

PDF, 426 KB

english, 2005

32

The GPR 55 agonist, L-α-lysophosphatidylinositol, mediates ovarian carcinoma cell-induced angiogenesis

Hofmann, Nicole A, Yang, Jiang, Trauger, Sunia A, Nakayama, Hironao, Huang, Lan, Strunk, Dirk, Moses, Marsha A, Klagsbrun, Michael, Bischoff, Joyce, Graier, Wolfgang F

Journal:

British Journal of Pharmacology

Année:

2015

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2015

33

How the glycosyltransferase OGT catalyzes amide bond cleavage

Janetzko, John, Trauger, Sunia A, Lazarus, Michael B, Walker, Suzanne

Journal:

Nature Chemical Biology

Année:

2016

Langue:

english

Fichier:

PDF, 532 KB

english, 2016

34

Erratum to: Ant and Mite Diversity Drives Toxin Variation in the Little Devil Poison Frog

McGugan, Jenna R., Byrd, Gary D., Roland, Alexandre B., Caty, Stephanie N., Kabir, Nisha, Tapia, Elicio E., Trauger, Sunia A., Coloma, Luis A., O’Connell, Lauren A.

Journal:

Journal of Chemical Ecology

Année:

2016

Langue:

english

Fichier:

PDF, 172 KB

english, 2016

35

Response to Heethoff, Norton, and Raspotnig: Ant and Mite Diversity Drives Toxin Variation in the Little Devil Poison Frog and Erratum

McGugan, Jenna R., Byrd, Gary D., Roland, Alexandre B., Caty, Stephanie N., Kabir, Nisha, Tapia, Elicio E., Trauger, Sunia A., Coloma, Luis A., O’Connell, Lauren A.

Journal:

Journal of Chemical Ecology

Année:

2016

Langue:

english

Fichier:

PDF, 240 KB

english, 2016

36

Identification of Residues in the Lipopolysaccharide ABC Transporter That Coordinate ATPase Activity with Extractor Function

Simpson, Brent W., Owens, Tristan W., Orabella, Matthew J., Davis, Rebecca M., May, Janine M., Trauger, Sunia A., Kahne, Daniel, Ruiz, Natividad

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 1.71 MB

english, 2016

37

Disulfide Transfer Enables Inverse-Prion Aggregation in Mixtures of Human Gamma-D Crystallin Variants

Serebryany, Eugene, Thai, Jimmy, Woodard, Jaie C., Yu, Shuhuai, Trauger, Sunia A., Budnik, Bogdan, Shakhnovich, Eugene I.

Journal:

Biophysical Journal

Année:

2018

Langue:

english

Fichier:

PDF, 47 KB

english, 2018

38

Peptide and protein analysis with mass spectrometry

Trauger, Sunia A., Webb, William, Siuzdak, Gary

Journal:

Spectroscopy / An International Journal

Année:

2002

Langue:

english

Fichier:

PDF, 1.32 MB

english, 2002

39

Protein characterization using Liquid Chromatography Desorption Ionization on Silicon Mass Spectrometry (LC-DIOS-MS)

Prenni, Jessica E., Shen, Zhouxin, Trauger, Sunia, Chen, Wei, Siuzdak, Gary

Journal:

Spectroscopy / An International Journal

Année:

2003

Langue:

english

Fichier:

PDF, 1.23 MB

english, 2003

40

Protein identification and profiling with mass spectrometry

Meyers, Andrew, Trauger, Sunia, Webb, William, Reisdorph, Nichole, Wranik, Cindy, Peters, Eric, Siuzdak, Gary

Journal:

Spectroscopy / An International Journal

Année:

2003

Langue:

english

Fichier:

PDF, 1.34 MB

english, 2003

41

Dynamic disulfide exchange in a crystallin protein in the human eye lens promotes cataract-associated aggregation

Serebryany, Eugene, Yu, Shuhuai, Trauger, Sunia A., Budnik, Bogdan, Shakhnovich, Eugene I.

Journal:

Journal of Biological Chemistry

Année:

2018

Langue:

english

Fichier:

PDF, 857 KB

english, 2018

42

Disulfide Exchange and Self-Catalyzed Aggregation in Cataract-Associated Human Gamma-D Crystallin

Serebryany, Eugene, Yu, Shuhuai, Trauger, Sunia A., Budnik, Bogdan, Shakhnovich, Eugene I.

Journal:

Biophysical Journal

Année:

2019

Fichier:

PDF, 49 KB

2019

43

Disulfide Exchange and Self-Catalyzed Aggregation in Cataract-Associated Human Gamma-D Crystallin

Serebryany, Eugene, Yu, Shuhuai, Trauger, Sunia A., Budnik, Bogdan, Shakhnovich, Eugene I.

Journal:

Biophysical Journal

Année:

2019

Langue:

english

Fichier:

PDF, 49 KB

english, 2019

44

Molecular physiology of chemical defenses in a poison frog

Caty, Stephanie N., Alvarez-Buylla, Aurora, Byrd, Gary D., Vidoudez, Charles, Roland, Alexandre B., Tapia, Elicio E., Budnik, Bogdan, Trauger, Sunia A., Coloma, Luis A., O'Connell, Lauren A.

Journal:

Journal of Experimental Biology

Année:

2019

Fichier:

PDF, 2.05 MB

2019

45

Mechanisms of Convergent Egg Provisioning in Poison Frogs

Fischer, Eva K., Roland, Alexandre B., Moskowitz, Nora A., Vidoudez, Charles, Ranaivorazo, Ndimbintsoa, Tapia, Elicio E., Trauger, Sunia A., Vences, Miguel, Coloma, Luis A., O’Connell, Lauren A.

Journal:

Current Biology

Année:

2019

Langue:

english

Fichier:

PDF, 2.40 MB

english, 2019